Commit Graph
10 Commits
Author SHA1 Message Date
chendun1995andClaude Opus 5.5 d86732ff0a v2 run (D53-D57): recomputed truths and RCT truths, re-rendered draft report; one thread per worker
Main draft grid 2,700 jobs and physician-cluster bootstrap 80 jobs, 0 errors.
Report prose in Section 1+ still quotes first-run numbers; to be rewritten after the Aim 1 review.

Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-30 09:09:26 -04:00
chendun1995andClaude Opus 5.5 ae58d0f7ca D57: run-time trims (V3 skipped where physician plays no role, NCE without V3, landmark_m5 under V1 only)
Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-28 16:54:42 -04:00
chendun1995andClaude Opus 5.5 3aa6c1c5b3 D56: limb MALE (CLTI, major amputation, open bypass) as primary outcome; MALE incl. repeat revascularization to supplement
Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-28 16:39:59 -04:00
chendun1995andClaude Opus 5.5 d369a16208 D55: EHR/registry-like world (noisy severity), non-random trial consent, trial analyses at 12/24/60 months
Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-28 16:26:01 -04:00
chendun1995andClaude Opus 5.5 5304c89316 D53: landmark on baseline covariates (month-5 version as landmark_m5), NCO-1 depends on PVI-free severity, physician-cluster bootstrap script
Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-28 07:20:32 -04:00
chendun1995andClaude Opus 5.5 fbc417662c Draft results: performance summary, draft report (Figs 1-3, Tables 2-5), D52 open questions
Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-28 06:59:49 -04:00
chendun1995andClaude Opus 5.5 cfc9da2c87 Speed-ups (shared PVI fit, clones once, case-control sampled deferred model); final scale 200 reps extending the draft (D51)
Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-27 09:31:03 -04:00
chendun1995andClaude Opus 5.5 383ef89c2a Validation, NCE analysis, per-replicate oracle for landmark/naive, RCT truths script, resumable experiment runner
- W0 harm validation (40 reps): CCW and sequential ITT unbiased for their truths (|z| <= 0.7)
- PVI models fitted separately inside and after the window
- experiments.yml grid (8 worlds x 3 scenarios; designs x V1-V4; NCE; RCTs); smoke run clean

Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-27 09:19:59 -04:00
chendun1995andClaude Opus 5.5 fc1461d5b5 Truths, estimators (naive, landmark, CCW, sequential; physician variants V1-V4) and simulated RCTs
- truths.R: interventional truths by common random numbers (A, B1, B2, sequential ITT)
- estimators.R: weighted Aalen-Johansen with influence-function SEs (patient / physician cluster)
- rct.R: realistic and ideal trials, ITT and as-treated; RCT ITT truths
- scenario effects tuned in W0: harm +5.1 pp, benefit-then-harm -1.2 pp at 24 mo, +3.1 at 60

Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-27 09:01:13 -04:00
chendun1995andClaude Opus 5.5 5c4407f876 pvisim: parameters, simulator, claims records, tests; calibration of all worlds to Medicare targets
- latent-severity DGP with physicians (skill, style), policies A/B1/B2/sequential, common random numbers
- sharp null exact at the patient level (tested)
- 01_calibrate.R: joint logit-scale update; all worlds match early PVI 3.2%, late PVI 22.5/3.6%, CLTI 7.8%, death 35%
- W4 deferral target 15% (trial-like crossover); post-CLTI PVI lowered so late PVI is mostly elective

Co-Authored-By: Claude Opus 5.5 <[email protected]>
2026-10-27 08:15:18 -04:00